Abstract:Objective To analyze the expression of sigma factor in drug resistance gene mutations of Mycobacterium tuberculosis (MTB), so as to provide a reference for the drug resistance mechanism of tuberculosis. Methods Clinical sputum specimens of outpatients at Tianjin Center for Tuberculosis from 2018 to 2022 were collected. A total of 899 MTB-positive strains were obtained by culture, and 492 phenotypically sensitive strains and 407 phenotypically resistant strains were identified by an in vitro phenotypic drug susceptibility test. Thirty drug-sensitive strains of MTB were randomly selected, and 98 drug-resistant strains with specific resistance phenotypes were chosen; all were subjected to melting curve analysis for detection of drug-resistance gene mutations. The strains were divided into sensitive strains without gene mutation, isoniazid-resistant strains with inhA mutation or katG mutation, rifampicin-resistant strains with rpoB mutation, and multigene mutation-resistant strains with inhA+rpoB mutation or katG+rpoB mutation. The mRNA relative expression of sigma factor was detected by fluorescence quantitative PCR, and the ratio of sigma factor mRNA relative expression between the experimental strain and the standard strain >2 was used to screen for highly expressed sigma factor. The differences in sigma factor mRNA relative expression and high expression rate between drug-resistant gene mutant strains and sensitive strains were analyzed. Results Thirty sensitive strains and 90 drug-resistant strains were included. Among them, there were 16 strains with inhA mutation, 22 strains with katG mutation, 13 strains with rpoB mutation, 15 strains with inhA+rpoB mutation, and 24 strains with katG+rpoB mutation. Compared to the sigma factors of the sensitive strains, the mRNA expression levels of sigG and sigI in inhA-mutated strains, sigF, sigG, sigH, sigI, sigJ, and sigL in katG-mutated strains, and sigF, sigG, sigH, sigJ, and sigL in rpoB-mutated, inhA+rpoB-mutated, and katG+rpoB-mutated strains were significantly higher (all P<0.05). Additionally, the high-expression rates of sigI in inhA-mutated strains, sigF, sigG, sigI, sigJ, and sigL in katG-mutated and inhA+rpoB-mutated strains, and sigF, sigG, sigH, sigJ, and sigL in rpoB-mutated and katG+rpoB-mutated strains were also higher (all P<0.05). Conclusion Compared to sensitive MTB strains, sigI showed higher relative expression of mRNA and high-expression rate in inhA-mutated strains, and sigF, sigG, sigJ, and sigL had higher mRNA relative expression and high-expression rates in katG-mutated, rpoB-mutated, and multi-drug-resistant strains.
[1] GOLETTI D,MEINTJES G,ANDRADE B B,et al.Insights from the 2024 WHO Global Tuberculosis Report-More Comprehensive Action,Innovation,and Investments required for achieving WHO End TB goals[J/OL].Int J Infect Dis,150[2025-06-04].https://doi.org/10.1016/j.ijid.2024.107325. [2] 田丽,周伟,黄星,等.中国异烟肼耐药结核分枝杆菌基因突变特征分析[J].中国防痨杂志,2022,44(4):354-361. TIAN L,ZHOU W,HUANG X,et al.Analysis of genetic mutation characteristics of isoniazid-resistant Mycobacterium tuberculosis in China[J].Chin J Antituberc,2022,44(4):354-361.(in Chinese) [3] 杨彩虹,张萍,买买提艾力·艾合木提,等.结核分枝杆菌利福平耐药突变位点分析及耐药性快速检测[J].中国病原生物学杂志,2021,16(12):1387-1392. YANG C H,ZHANG P,MAIMAITIAILI A H M T,et al.Analysis of rifampicin-resistant mutation sites and rapid detection of drug resistance in Mycobacterium tuberculosis[J].J Pathog Biology,2021,16(12):1387-1392.(in Chinese) [4] EMILY C W,SHONNA M M.Regulation of antimicrobial resistance by extracytoplasmic function(ECF)sigma factors[J].Microbes Infect,2017,19(4):238-248. [5] 江丽娜. 结核分枝杆菌σ因子的调节机制和功能[J].职业与健康,2019,35(4):561-565. JIANG L N.Regulatory mechanisms and functions of sigma factors in Mycobacterium tuberculosis [J].Occup and Health,2019,35(4):561-565.(in Chinese) [6] MANGANELLI R,CIOETTO-MAZZABÒ L,SEGAFREDDO G,et al.SigE:a master regulator of Mycobacterium tuberculosis[J].Front Microbiol,2023,7(3):1-8. [7] 江丽娜,穆成,孙蕊,等.即时痰和体外培养条件下结核分枝杆菌sigma因子表达差异分析[J].公共卫生与预防医学,2023,34(3):52-55. JIANG L N,MU C,SUN R,et al.Analysis of expression differences of sigma factors in Mycobacterium tuberculosis under immediate sputum and in vitro culture conditions[J].J Public Health Prev Med,2023,34(3):52-55.(in Chinese) [8] 江丽娜,高丽,王志锐,等.Sigma因子基因表达与结核分枝杆菌异烟肼耐药关系探讨[J].中国热带医学,2024,24(3):299-303. JIANG L N,GAO L,WANG Z R,et al.Study on the relationship between sigma factor gene expression and isoniazid resistance in Mycobacterium tuberculosis[J].China Trop Med,2024,24(3):299-303.(in Chinese) [9] 江丽娜,高丽,王志锐,等.结核分枝杆菌异烟肼或利福平不同耐药表型中sigma因子表达差异研究[J].疾病监测,2024,39(9):1198-1203. JIANG L N,GAO L,WANG Z R,et al.Study on expression differences of sigma factors in different drug-resistant phenotypes of Mycobacterium tuberculosis to isoniazid or rifampicin[J].Dis Surveill,2024,39(9):1198-1203.(in Chinese) [10] 车洋,杨天池,平国华,等.外排泵基因Rv1456c、Rv1457c、Rv1458c表达与结核分枝杆菌耐药关系探讨[J].疾病监测,2019,34(6):1-5. CHE Y,YANG T C,PING G H,et al.Study on the relationship between the expression of efflux pump genes Rv1456c,Rv1457c,Rv1458c and drug resistance in Mycobacterium tuberculosis[J].Dis Surveill,2019,34(6):1-5.(in Chinese) [11] VERGNE I,CHUA J,SINGH S B,et al.Cellbiology of Mycobacterium tuberculosis phagosome[J].Annu Rev Cell Dev Biol,2004,20(1):367-394. [12] MICHELE T M,KO C,BISHAI W R.Exposure to antibiotics induces expression of the Mycobacterium tuberculosis sigF gene:implications for chemotherapy against mycobacterial persistors[J].Antimicrob Agents Chemother,1999,43(2):218-225. [13] MISRA R,MENON D,ARORA G,et al.Tuning the Mycobacterium tuberculosis alternative sigma factor sigF through the multidomain regulator Rv1364c and osmosensory kinase protein kinase D[J/OL].J Bacteriol,2019,201(7)[2025-06-04].https://doi.org/10.1128/JB.00725-18. [14] CIOETTO-MAZZABÒ L,BOLDRIN F,BEAUVINEAU C,et al.SigH stress response mediates killing of Mycobacterium tuberculosis by activating nitronaphthofuran prodrugs via induction of Mrx2 expression[J].Nucleic Acids Res,2023,51(1):144-165. [15] YEW W W,CHAN D P,CHANG K C,et al.Does oxidative stress contribute to antituberculosis drug resistance[J].J Thorac Dis,2019,11(7):100-102. [16] OCAMPO P S,LAZAR V,PAPP B,et al.Antagonism between bacteriostatic and bactericidal antibiotics is prevalent[J].Antimicrob Agents Chemother,2014,58(8):4573-4582.